Contaminated

Posted on September 22nd, 2008 in farming, genetics by Anastasia

A lot of people (including me!) are concerned with the possibility of genetically engineered crops spreading their pollen to nearby fields and to wild relatives. I covered some physical and genetic ways to prevent this in Gene flow, IP, and the terminator, but we all know that 100% exclusion of unwanted pollen is impossible (at least for now).

So, what happens when a farmer’s field or wild plant population 

is “contaminated” with a transgene? Can they be decontaminated?

What about gene flow from non-transgenic crops? Strangely, none of the people concerned with transgenic gene flow seem to be concerned about non-transgenic pollen from modern cultivars, which is a much bigger problem.

I use “contaminated” in quotes because nature doesn’t see the distinctions we see. Transgene or not, wild or cultivated, all go into a big mixing pot to be stirred by random mating and natural selection.

Life cycle analysis in animal agriculture

Posted on September 22nd, 2008 in Environment, academia, farming by Anastasia

In Reducing the environmental impact of farming, I talked about Nathan Pelliter’s work on Agricultural Life Cycle Analysis as a way to evaluate which farming methods have the least environmental impact. While the ideas apply to any type of farming (or really to the production of anything), his main work is actually on animal agriculture.

The return on investment of most types of animal agriculture is small compared to that of plant agriculture. For example, cattle require about 6 pounds of feed to produce 1 pound of muscle. All of the water, fertilizer, and pesticides required to grow 1 pound of plant material is thus multiplied by 6 to produce 1 pound of beef. Granted, it isn’t quite that simple, as parts of plants that aren’t used for human food can be fed to animals, but the point holds, even in organic systems.

Reducing the environmental impact of farming

Posted on September 12th, 2008 in academia, farming by Anastasia

Atmospheric concentrations of greenhouse gasses are rising, but reducing them isn’t as simple as taking cars off the road. A significant part of the problem rests is agriculture. What is it about agriculture that is such a problem and how can we develop changes that will have the most benefit?

Agricultural Life Cycle Analysis is a useful tool in collecting information and making decisions. LCAs take every input and every output into consideration including difficult to consider ouputs like greenhouse gas emissions.

Nathan Pelletier from Dalhouse Uni in Nova Scotia presented his work on ag LCAs at Iowa State recently. He explains that actually conducting LCAs can be difficult. First, we need to define the scope of the analysis. For example, if we consider milk production, we should likely include the cow herself, food, water, and waste. We probably should include all of the inputs and outputs associated with feed production and transportation. We might include the inputs and outputs of pasteurizing and transporting the milk. Also difficult is actually quantifying all of the inputs and outputs to air, soil, and water. Finally, it is difficult to complete a meaningful impact assessment including the identification of “hotspots” or most negative impacts. Despite the difficulties, LCAs are worth the effort. Nathan reminds us that agriculture produces 1/3 of global warming emissions. The demand for food will will double by 2050, so we need to half the impact to continue a constant level of damage.

Even scientists make mistakes

Posted on September 11th, 2008 in academia, biofuels, education by Anastasia

I went to a seminar titled “Harvesting ecosystem services from cellulosic biofuel landscapes” at Iowa State yesterday. The speaker was Michigan State Professor of Entomology Douglas Landis. His research is very practical, focusing on which types of plants should be used in biomass production for biofuels to encourage the highest biodiversity of insects. This is important because insects provide many ecosystem services, including pollination and predation of pests.

His work shows that switchgrass and mixed prairie encouraged higher numbers of some native insect species, but also encouraged some invasive insects. Corn likewise had mixed results (especially encouraging native insects that like to eat corn!). His methods of data collection are simply fun - low tech but effective - nets, sticky traps, leaf blowers turned into vacuums, and such.

It’s good work, because we really need people working on the sustainability issues associated with farming. Growing biomass for fuel, as any farming, could be beneficial or detrimental to the environment - it’s up to people like Dr. Landis to make sure it’s the former.

Unfortunately, Dr. Landis seems to be misinformed on one issue - Bt crops. I won’t go into too much detail here, but Bt crops have been shown to increase insect biodiversity because overall levels of pesticide are decreased. I would have thought that an entomologist concerned with biodiversity would at least contemplate a cost-benefit analysis of Bt.

In the introduction of his talk, Dr. Landis mentioned the 2007 PNAS paper “Toxins in transgenic crop byproducts may affect headwater stream ecosystems”. This paper is more than a little controversial, because the authors make broad claims that do not follow from their results. The authors make the typical mistake of lumping that is never appropriate in science. All Bt is not the same, all aquatic insects are not the same, all corn fields are not managed in the same way… Dr. Landis should have at a minimum mentioned that the paper has been contested before trotting it out as evidence.

I wrote about the press release of the paper when it first came out, and I continue to be frustrated by the mediocre science and the terrible way that people twist results to make the point they want. Feel free to read the paper for yourself, but don’t pass up the rebuttals. Beachy, et. al. make the point that papers like this are taken by the popular media and used to fuel debates - regardless of the strength of the science. It truly is the responsibility of every scientist and especially of every reviewer to put aside personal bias for or against the paper and make sure the conclusions are supported as much as possible by hard evidence. The reviewers of this paper should have sent it back, requesting some of the experiments explained in the rebuttals (such as dose-response measurements, as suggested by Parrott).

Dr. Landis showed this pair of images from the Rosi-Marshall paper, implying that corn residues in streams are all the fault of genetic engineering, as if organic corn crops or other crops in general don’t clutter up streamheads. He seems to think that harvesting switchgrass or mixed prarie would somehow not leave the same sorts of residues in streams.

Of course, all crops are going to leave residues in nearby streams, plant matter that is not a natural part of the ecosystem. What I find most ironic is that, if crop residues actually do damage streams, we should start harvesting them for biofuels right now!

To make things even worse, Dr. Landis told the audience (full of impressionable sustainable ag majors) that “the Bt toxin leaches from crop residues into streams where it kills aquatic insects.” This statement is wrong for a lot of reasons, the main one being that there is zero evidence that Bt leaches from the plants that produce it. If you know of any evidence showing that it does, please let me know, but I’m not going to hold my breath.

ResearchBlogging.orgE. J. Rosi-Marshall, J. L. Tank, T. V. Royer, M. R. Whiles, M. Evans-White, C. Chambers, N. A. Griffiths, J. Pokelsek, M. L. Stephen (2007). Toxins in transgenic crop byproducts may affect headwater stream ecosystems Proceedings of the National Academy of Sciences, 104 (41), 16204-16208 DOI: 10.1073/pnas.0707177104

What is the meaning and significance of the agricultural biotechnology debate?

Posted on September 11th, 2008 in education by Anastasia

Our first assignment in the Debating Science program was to write about “What is the meaning and significance of the agricultural biotechnology debate?” I chose to investigate the controversy and possible ways to move past it. Let me know what you think.

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